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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015793447.1_cds_XP_016433870.1_2914
CDS Infomation

[gene=LOC107760344] [db_xref=GeneID:107760344] [protein=exopolygalacturonase-like] [protein_id=XP_016433870.1] [location=join(72675..72806,74244..74552,74865..75377,77496..77627,79929..80147)] [gbkey=CDS]
Sequence

ATGGCGTTCATTTCTAGTTTCGGAATAGCCTTTGTATTATACCTTATTCTTGGGTGCAGT
AGTGCAGAGGAGAATCTCTTCAATGTCCAATCCTATGGTGCTATAGCAGATGGAAAGACA
GATAATAGTAAGGCATTCTTGAGTACTTGGAAGGATGCATGCCAATGGAATGGAACAGCC
AAATTCTTGATACCTTCAGGGGAATACATGGTATATGCTGCAAATTTTATCGGACCATGT
AGTGGATCCATGACCTTCCAAATCCAAGGAGTTGTTAAAGCTCCAACAGATCCTTCTCTA
TTCTGCAATACGACTTGGATTTCCATTCAGTATGTGAATGGCTTAGAGATTGAAGGAGGC
GGAACTTTAGATGGACAAGGGGCTTCAGCTTGGCCTTATTTTGATACTTCCAAGAATTCT
AATTGCCCAACCCTTCCTATTACACTCAAATTAGATTTTATCGAAAATGCGACGGTGCAC
GACATAAACTCAATCAATAGCAAGAGTTTCCATTTCGACCTCTTTAGGTGCAATAACGTG
ACATTTAGTCATGTTAACCTAACCGCACCGGGCGACAGCCCTAACACCGATGGCATTCAC
ATGGGCGTCTCCACCAACATCCAAGTTTCGGATTCAAACATTGGCACTGGAGACGATTGT
ATATCTATGATCAACGGCAGCCAAAGCATCAACATTTCAGGGATCACTTGTGGCCCTGGC
CATGGAATAAGCATCGGAAGCTTAGGGAAGACACAAAATGAAGTCGTCACAGACATACAT
GTCAAAAATTGCACTCTCATTGCTACTCAAAATGGCGCCAGGATTAAGACTTGGGCACCA
TCGGAGTCTGGTAGTGCCACAAATATAAATTTTGAGGATATTTTCATGGATAATGTTAGA
AATCCTATCATTATCGATCAACATTATTGTCCATCGCCTCCTTGCAGCAGTGAGGCGAGC
TCAGTGCAAATCAAGGACGTGACATTCAATAACATAAGAGGAACTTCGAGTTCAGTGGCA
GCTGTTACTTTGAATTGCAGTGCTTCATTTCCTTGCCAGGGAATCAACCTTACAGAAATC
AATTTGACTTCAGCTGTTGCATTGCAGGCTTCGCATTTGCGAAGCCTAGCTCGCAAATAC
GAGTTTGCAAATGCGAGGGCTGAGTCGCAAATGCGAAACAGCCCAGACCAGCCCTTCCTC
GCAAATGCGAGATTTTCCTTCGCAAATGCGATGCTCCCTATTTGGGCCTGTCATCGCAAA
TGTGACTGTATGTTCGCAATTCCCGCTTCGCAAATGCGAGCTTAG

Peptide Sequence

PEP ID

XP_016433870.1
PEP Infomation

PREDICTED: exopolygalacturonase-like [Nicotiana tabacum]
Sequence

MAFISSFGIAFVLYLILGCSSAEENLFNVQSYGAIADGKTDNSKAFLSTWKDACQWNGTA
KFLIPSGEYMVYAANFIGPCSGSMTFQIQGVVKAPTDPSLFCNTTWISIQYVNGLEIEGG
GTLDGQGASAWPYFDTSKNSNCPTLPITLKLDFIENATVHDINSINSKSFHFDLFRCNNV
TFSHVNLTAPGDSPNTDGIHMGVSTNIQVSDSNIGTGDDCISMINGSQSINISGITCGPG
HGISIGSLGKTQNEVVTDIHVKNCTLIATQNGARIKTWAPSESGSATNINFEDIFMDNVR
NPIIIDQHYCPSPPCSSEASSVQIKDVTFNNIRGTSSSVAAVTLNCSASFPCQGINLTEI
NLTSAVALQASHLRSLARKYEFANARAESQMRNSPDQPFLANARFSFANAMLPIWACHRK
CDCMFAIPASQMRA

Transcript Sequence

Gene sequence data has not been registered.